Publications of Ilian Atanassov

Journal Article (34)

2023
Journal Article
Kim, J. Y.; Atanassov, I.; Dethloff, F.; Kroczek, L.; Langer, T.: Time-resolved proteomic analyses of senescence highlight metabolic rewiring of mitochondria. Life science alliance 6 (9), e202302127 (2023)
Journal Article
Remes , C.; Khawaja, A.; Pearce, S. F.; Dinan, A. M.; Gopalakrishna, S.; Cipullo, M.; Kyriakidis, V.; Zhang, J.; Dopico, X. C.; Yukhnovets, O. et al.; Atanassov, I.; Firth, A. E.; Cooperman, B.; Rorbach, J.: Translation initiation of leaderless and polycistronic transcripts in mammalian mitochondria. Nucleic Acids Research (2023)
Journal Article
Krüger, A.; Remes, C.; Shiriaev, D. I.; Liu, Y.; Spåhr, H.; Wibom, R.; Atanassov, I.; Nguyen, M. D.; Cooperman, B. S.; Rorbach, J.: Human mitochondria require mtRF1 for translation termination at non-canonical stop codons. Nature Communications 14, 30 (2023)
Journal Article
Milenkovic, D.; Misic, J.; Hevler, J. F.; Molinié, T.; Chung, I.; Atanassov, I.; Li, X.; Filograna, R.; Mesaros, A.; Mourier, A. et al.; Heck, A. J.R.; Hirst, J.; Larsson, N.-G.: Preserved respiratory chain capacity and physiology in mice with profoundly reduced levels of mitochondrial respirasomes. Cell Metabolism (2023)
2022
Journal Article
Itoh, Y.; Khawaja, A.; Laptev, I.; Cipullo, M.; Atanassov, I.; Sergiev, P.; Rorbach, J.; Amunts, A.: Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature 606 (7914), pp. 603 - 608 (2022)
Journal Article
Li, X.; Straub, J.; Medeiros, T. C.; Mehra, C.; den Brave, F.; Peker, E.; Atanassov, I.; Stillger, K.; Michaelis, J. B.; Burbridge, E. et al.; Adrain, C.; Munch, C.; Riemer, J.; Becker, T.; Pernas, L.: Mitochondria shed their outer membrane in response to infection-induced stress. Science 375 (6577), p. eabi4343 (2022)
2021
Journal Article
Bonekamp, N.; Jiang, M.; Motori, E.; Garcia Villegas, R.; Koolmeister, C.; Atanassov, I.; Mesaros, A.; Park, C. B.; Larsson, N.G.: High levels of TFAM repress mammalian mitochondrial DNA transcription in vivo. Life Sci Alliance 4 (11), p. e202101034 (2021)
Journal Article
Koester, J.; Miroshnikova, Y. A.; Ghatak, S.; Chacón-Martínez, C. A.; Morgner, J.; Li, X.; Atanassov, I.; Altmuller, J.; Birk, D. E.; Koch, M. et al.; Bloch, W.; Bartusel, M.; Niessen, C. M.; Rada-Iglesias, A.; Wickström, S. A.: Niche stiffening compromises hair follicle stem cell potential during ageing by reducing bivalent promoter accessibility. Nat Cell Biol 23 (7), pp. 771 - 781 (2021)
Journal Article
Jiang, M.; Xie, X.; Zhu, X.; Jiang, S.; Milenkovic, D.; Misic, J.; Shi, Y.; Tandukar, N.; Li, X.; Atanassov, I. et al.; Jenninger, L.; Hoberg, E.; Albarran-Gutierrez, S.; Szilagyi, Z.; Macao, B.; Siira, S. J.; Carelli, V.; Griffith, J. D.; Gustafsson, C. M.; Nicholls, T. J.; Filipovska, A.; Larsson, N.G.; Falkenberg, M.: The mitochondrial single-stranded DNA binding protein is essential for initiation of mtDNA replication. Sci Adv 7 (27), p. eabf8631 (2021)
Journal Article
Tain, L.; Sehlke, R.; Meilenbrock, R. L.; Leech, T.; Paulitz, J.; Chokkalingam, M.; Nagaraj, N.; Grönke, S.; Fröhlich, J.; Atanassov, I. et al.; Mann, M.; Beyer, A.; Partridge, L.: Tissue-specific modulation of gene expression in response to lowered insulin signalling in Drosophila. Elife 10 (2021)
Journal Article
Ruegenberg, S.; Mayr, F. A. M.C.; Atanassov, I.; Baumann, U.; Denzel, M.: Protein kinase A controls the hexosamine pathway by tuning the feedback inhibition of GFAT-1. Nat Commun 12 (1), p. 2176 (2021)
Journal Article
Schober, F. A.; Atanassov, I.; Moore, D.; Calvo-Garrido, J.; Moedas, M. F.; Wedell, A.; Freyer, C.; Wredenberg, A.: Stable Isotope Labeling of Amino Acids in Flies (SILAF) Reveals Differential Phosphorylation of Mitochondrial Proteins Upon Loss of OXPHOS Subunits. Mol Cell Proteomics 20, p. 100065 (2021)
Journal Article
Schober, F. A.; Moore, D.; Atanassov, I.; Moedas, M. F.; Clemente, P.; Vegvari, A.; Fissi, N. E.; Filograna, R.; Bucher, A. L.; Hinze, Y. et al.; The, M.; Hedman, E.; Chernogubova, E.; Begzati, A.; Wibom, R.; Jain, M.; Nilsson, R.; Kall, L.; Wedell, A.; Freyer, C.; Wredenberg, A.: The one-carbon pool controls mitochondrial energy metabolism via complex I and iron-sulfur clusters. Sci Adv 7 (8) (2021)
Journal Article
Li, X.; Franz, T.; Atanassov, I.; Colby, T.: Step-by-Step Sample Preparation of Proteins for Mass Spectrometric Analysis. Methods Mol Biol 2261, pp. 13 - 23 (2021)
Journal Article
Schober, F. A.; Atanassov, I.; Freyer, C.; Wredenberg, A.: Quantitative Proteomics in Drosophila with Holidic Stable-Isotope Labeling of Amino Acids in Fruit Flies (SILAF). Methods Mol Biol 2192, pp. 75 - 87 (2021)
2020
Journal Article
Bonekamp, N.; Peter, B.; Hillen, H. S.; Felser, A.; Bergbrede, T.; Choidas, A.; Horn, M.; Unger, A.; Di Lucrezia, R.; Atanassov, I. et al.; Li, X.; Koch, U.; Menninger, S.; Boros, J.; Habenberger, P.; Giavalisco, P.; Cramer, P.; Denzel, M. S.; Nussbaumer, P.; Klebl, B.; Falkenberg, M.; Gustafsson, C. M.; Larsson, N.G.: Small-molecule inhibitors of human mitochondrial DNA transcription. Nature 588 (7839), pp. 712 - 716 (2020)
Journal Article
Cipullo, M.; Pearce, S. F.; Lopez Sanchez, I. G.; Gopalakrishna, S.; Kruger, A.; Schober, F.; Busch, J. D.; Li, X.; Wredenberg, A.; Atanassov, I. et al.; Rorbach, J.: Human GTPBP5 is involved in the late stage of mitoribosome large subunit assembly. Nucleic Acids Res 49 (1), pp. 354 - 370 (2020)
Journal Article
Motori, E.; Atanassov, I.; Kochan, S. M. V.; Folz-Donahue, K.; Sakthivelu, V.; Giavalisco, P.; Toni, N.; Puyal, J.; Larsson, N.G.: Neuronal metabolic rewiring promotes resilience to neurodegeneration caused by mitochondrial dysfunction. Sci Adv 6 (35), p. eaba8271 (2020)
Journal Article
Tharyan, R. G.; Annibal, A.; Schiffer, I.; Laboy, R.; Atanassov, I.; Weber, A. L.; Gerisch, B.; Antebi, A.: NFYB-1 regulates mitochondrial function and longevity via lysosomal prosaposin. Nat Metab 2 (5), pp. 387 - 396 (2020)
Journal Article
Alsina, D.; Lytovchenko, O.; Schab, A.; Atanassov, I.; Schober, F. A.; Jiang, M.; Koolmeister, C.; Wedell, A.; Taylor, R. W.; Wredenberg, A. et al.; Larsson, N.G.: FBXL4 deficiency increases mitochondrial removal by autophagy. EMBO Mol Med 12 (7), p. e11659 (2020)
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