Metabolomics Core Facility

Journal Article (41)

2021
Journal Article
Pujol, C.; Legrand, A.; Parodi, L.; Thomas, P.; Mochel, F.; Saracino, D.; Coarelli, G.; Croon, M.; Popovic, M.; Valet, M. et al.; Villain, N.; Elshafie, S.; Issa, M.; Zuily, S.; Renaud, M.; Marelli-Tosi, C.; Legendre, M.; Trimouille, A.; Kemlin, I.; Mathieu, S.; Gleeson, J. G.; Lamari, F.; Galatolo, D.; Alkouri, R.; Tse, C.; Rodriguez, D.; Ewenczyk, C.; Fellmann, F.; Kuntzer, T.; Blond, E.; El Hachimi, K. H.; Darios, F.; Seyer, A.; Gazi, A. D.; Giavalisco, P.; Perin, S.; Boucher, J. L.; Le Corre, L.; Santorelli, F. M.; Goizet, C.; Zaki, M. S.; Picaud, S.; Mourier, A.; Steculorum, S. M.; Mignot, C.; Durr, A.; Trifunovic, A.; Stevanin, G.: Implication of folate deficiency in CYP2U1 loss of function. J Exp Med 218 (11) (2021)
Journal Article
Alseekh, S.; Aharoni, A.; Brotman, Y.; Contrepois, K.; D'Auria, J.; Ewald, J.; J, C. E.; Fraser, P. D.; Giavalisco, P.; Hall, R. D. et al.; Heinemann, M.; Link, H.; Luo, J.; Neumann, S.; Nielsen, J.; Perez de Souza, L.; Saito, K.; Sauer, U.; Schroeder, F. C.; Schuster, S.; Siuzdak, G.; Skirycz, A.; Sumner, L. W.; Snyder, M. P.; Tang, H.; Tohge, T.; Wang, Y.; Wen, W.; Wu, S.; Xu, G.; Zamboni, N.; Fernie, A. R.: Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices. Nat Methods 18 (7), pp. 747 - 756 (2021)
Journal Article
Sieben, A.; Hausen, A. C.; Klemm, P.; Jais, A.; Heilinger, C.; Alber, J.; Folz-Donahue, K.; Schumacher, L.; Altmüller, J.; Franitza, M. et al.; Giavalisco, P.; Hinze, Y.; Brodesser, S.; Kukat, C.; Theurich, S.; Brüning, J. C.: P2Y6 receptor signaling in natural killer cells impairs insulin sensitivity in obesity. bioRxiv, p. 2021.06.23.449596 (2021)
Journal Article
Gassen, N. C.; Papies, J.; Bajaj, T.; Emanuel, J.; Dethloff, F.; Chua, R. L.; Trimpert, J.; Heinemann, N.; Niemeyer, C.; Weege, F. et al.; Honzke, K.; Aschman, T.; Heinz, D. E.; Weckmann, K.; Ebert, T.; Zellner, A.; Lennarz, M.; Wyler, E.; Schroeder, S.; Richter, A.; Niemeyer, D.; Hoffmann, K.; Meyer, T. F.; Heppner, F. L.; Corman, V. M.; Landthaler, M.; Hocke, A. C.; Morkel, M.; Osterrieder, N.; Conrad, C.; Eils, R.; Radbruch, H.; Giavalisco, P.; Drosten, C.; Muller, M. A.: SARS-CoV-2-mediated dysregulation of metabolism and autophagy uncovers host-targeting antivirals. Nat Commun 12 (1), p. 3818 (2021)
Journal Article
Stepanova, V.; Moczulska, K. E.; Vacano, G. N.; Kurochkin, I.; Ju, X.; Riesenberg, S.; Macak, D.; Maricic, T.; Dombrowski, L.; Schornig, M. et al.; Anastassiadis, K.; Baker, O.; Naumann, R.; Khrameeva, E.; Vanushkina, A.; Stekolshchikova, E.; Egorova, A.; Tkachev, A.; Mazzarino, R.; Duval, N.; Zubkov, D.; Giavalisco, P.; Wilkinson, T. G.; Patterson, D.; Khaitovich, P.; Paabo, S.: Reduced purine biosynthesis in humans after their divergence from Neandertals. Elife 10 (2021)
Journal Article
Schober, F. A.; Moore, D.; Atanassov, I.; Moedas, M. F.; Clemente, P.; Vegvari, A.; Fissi, N. E.; Filograna, R.; Bucher, A. L.; Hinze, Y. et al.; The, M.; Hedman, E.; Chernogubova, E.; Begzati, A.; Wibom, R.; Jain, M.; Nilsson, R.; Kall, L.; Wedell, A.; Freyer, C.; Wredenberg, A.: The one-carbon pool controls mitochondrial energy metabolism via complex I and iron-sulfur clusters. Sci Adv 7 (8) (2021)
Journal Article
Nikopoulou, C.; Kleinenkuhnen, N.; Parekh, S.; Sandoval, T.; Schneider, F.; Giavalisco, P.; Bozukova, M.; Vesting, A. J.; Altmüller, J.; Wunderlich, T. et al.; Kondylis, V.; Tresch, A.; Tessarz, P.: Single-cell resolution unravels spatial alterations in metabolism, transcriptome and epigenome of ageing liver. bioRxiv 15 (134), p. jcs259051 (2021)
Journal Article
Pouikli, A.; Parekh, S.; Maleszewska, M.; Nikopoulou, C.; Baghdadi, M.; Tripodi, I.; Folz-Donahue, K.; Hinze, Y.; Mesaros, A.; Hoey, D. et al.; Giavalisco, P.; Dowell, R.; Partridge, L.; Tessarz, P.: Chromatin remodeling due to degradation of citrate carrier impairs osteogenesis of aged mesenchymal stem cells. Nature Aging 1 (9), pp. 810 - 825 (2021)
Journal Article
Sprenger, H.-G.; MacVicar, T.; Bahat, A.; Fiedler, K. U.; Hermans, S.; Ehrentraut, D.; Ried, K.; Milenkovic, D.; Bonekamp, N.; Larsson, N.G. et al.; Nolte, H.; Giavalisco, P.; Langer, T.: Cellular pyrimidine imbalance triggers mitochondrial DNA–dependent innate immunity. Nature Metabolism 3 (5), pp. 636 - 650 (2021)
2020
Journal Article
Bonekamp, N.; Peter, B.; Hillen, H. S.; Felser, A.; Bergbrede, T.; Choidas, A.; Horn, M.; Unger, A.; Di Lucrezia, R.; Atanassov, I. et al.; Li, X.; Koch, U.; Menninger, S.; Boros, J.; Habenberger, P.; Giavalisco, P.; Cramer, P.; Denzel, M. S.; Nussbaumer, P.; Klebl, B.; Falkenberg, M.; Gustafsson, C. M.; Larsson, N.G.: Small-molecule inhibitors of human mitochondrial DNA transcription. Nature 588 (7839), pp. 712 - 716 (2020)
Journal Article
Motori, E.; Atanassov, I.; Kochan, S. M. V.; Folz-Donahue, K.; Sakthivelu, V.; Giavalisco, P.; Toni, N.; Puyal, J.; Larsson, N.G.: Neuronal metabolic rewiring promotes resilience to neurodegeneration caused by mitochondrial dysfunction. Sci Adv 6 (35), p. eaba8271 (2020)
Journal Article
Kim, C. S.; Ding, X.; Allmeroth, K.; Biggs, L. C.; Kolenc, O. I.; L'Hoest, N.; Chacón-Martínez, C. A.; Edlich-Muth, C.; Giavalisco, P.; Quinn, K. P. et al.; Denzel, M. S.; Eming, S. A.; Wickström, S. A.: Glutamine Metabolism Controls Stem Cell Fate Reversibility and Long-Term Maintenance in the Hair Follicle. Cell Metab 32 (4), pp. 629 - 642 e8 (2020)
Journal Article
Cui, D.; Mesaros, A.; Burdeos, G.; Voigt, I.; Giavalisco, P.; Hinze, Y.; Purrio, M.; Neumaier, B.; Drzezga, A.; Obata, Y. et al.; Endepols, H.; Xu, X.: Dnmt3a2/Dnmt3L Overexpression in the Dopaminergic System of Mice Increases Exercise Behavior through Signaling Changes in the Hypothalamus. Int J Mol Sci 21 (17), p. 6297 (2020)
Journal Article
Timper, K.; Del Rio-Martin, A.; Cremer, A. L.; Bremser, S.; Alber, J.; Giavalisco, P.; Varela, L.; Heilinger, C.; Nolte, H.; Trifunovic, A. et al.; Horvath, T. L.; Kloppenburg, P.; Backes, H.; Bruning, J. C.: GLP-1 Receptor Signaling in Astrocytes Regulates Fatty Acid Oxidation, Mitochondrial Integrity, and Function. Cell Metab 31 (6), pp. 1189 - 1205 e13 (2020)
Journal Article
Goebel, J.; Engelhardt, E.; Pelzer, P.; Sakthivelu, V.; Jahn, H. M.; Jevtic, M.; Folz-Donahue, K.; Kukat, C.; Schauss, A.; Frese, C. K. et al.; Giavalisco, P.; Ghanem, A.; Conzelmann, K. K.; Motori, E.; Bergami, M.: Mitochondria-Endoplasmic Reticulum Contacts in Reactive Astrocytes Promote Vascular Remodeling. Cell Metab 31 (4), pp. 791 - 808 e8 (2020)
2019
Journal Article
Schütter, M.; Giavalisco, P.; Brodesser, S.; Graef, M.: Local Fatty Acid Channeling into Phospholipid Synthesis Drives Phagophore Expansion during Autophagy. Cell (180), pp. 135 - 149 (2019)
Journal Article
Tkachev, A.; Stepanova, V.; Zhang, L.; Khrameeva, E.; Zubkov, D.; Giavalisco, P.; Khaitovich, P.: Differences in lipidome and metabolome organization of prefrontal cortex among human populations. Sci Rep 9 (1), p. 18348 (2019)
Journal Article
Bozek, K.; Khrameeva, E. E.; Reznick, J.; Omerbasic, D.; Bennett, N. C.; Lewin, G. R.; Azpurua, J.; Gorbunova, V.; Seluanov, A.; Regnard, P. et al.; Wanert, F.; Marchal, J.; Pifferi, F.; Aujard, F.; Liu, Z.; Shi, P.; Paabo, S.; Schroeder, F.; Willmitzer, L.; Giavalisco, P.; Khaitovich, P.: Lipidome determinants of maximal lifespan in mammals. Scientific Reports 9 (2019)
Journal Article
Kurochkin, I.; Khrameeva, E.; Tkachev, A.; Stepanova, V.; Vanyushkina, A.; Stekolshchikova, E.; Li, Q.; Zubkov, D.; Shichkova, P.; Halene, T. et al.; Willmitzer, L.; Giavalisco, P.; Akbarian, S.; Khaitovich, P.: Metabolome signature of autism in the human prefrontal cortex. Communications Biology 2 (234) (2019)
2015
Journal Article
Steculorum, S. M.; Paeger, L.; Bremser, S.; Evers, N.; Hinze, Y.; Idzko, M.; Kloppenburg, P.; Bruning, J. C.: Hypothalamic UDP Increases in Obesity and Promotes Feeding via P2Y6-Dependent Activation of AgRP Neurons. Cell 162 (6), pp. 1404 - 17 (2015)
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