Publications

García Fernández, F.; Park, J.; Chapuis, C.; Pinto Jurado, E.; Imburchia, V.; Smith, R.; José Longarini, E.; Taddei, A.; Hubert, C.; Sokolovska, N. et al.; Matić, I.; Huet, S.; Miné-Hattab, J.: Single nucleosome imaging reveals principles of transient multiscale chromatin reorganization triggered by histone ADP-ribosylation at DNA lesions. Nature Communications 16, 6652 (2025)

Kolvenbach, A.; Palumbieri, M. D.; Colby, T.; Nadarajan, D.; Bode, R.; Matić, I.: Serine ADPr on histones and PARP1 is a cellular target of ester-linked ubiquitylation. Nature Chemical Biology (2025)

Mukherjee, R.; Bhattacharya, A.; Tomaskovic, I.; Mello-Vieira, J.; Brunstein, M. E.; Başoğlu, M.; Veenendaal, T.; Bailey, H.; Colby, T.; Misra, M. et al.; Eimer, S.; Klumperman, J.; Münch, C.; Matić, I.; Dikic, I.: Phosphoribosyl ubiquitination of SNARE proteins regulates autophagy during Legionella infection. The EMBO Journal (2025)

Kaur, S.; Colby, T.; Thieme, D.; Proksch, C.; Matschi, S.; Matić, I.; Wirthmueller, L.: Untargeted Proteomics Identifies Plant Substrates of the Bacterial‐Derived ADP‐Ribosyltransferase AvrRpm1. Plant Direct 9 (2025)

Mukherjee, R.; Bhattacharya, A.; Mello-Vieira, J.; Kuncha, S. K.; Hoffmann, M.; Gonzalez, A.; Rathore, R.; Chadha, A.; Shin, D.; Colby, T. et al.; Matić, I.; Mukherjee, S.; Misra, M.; Dikic, I.: Serine ubiquitination of SQSTM1 regulates NFE2L2-dependent redox homeostasis. Autophagy (2024)

Longarini, E. J.; Matić, I.: Preserving ester-linked modifications reveals glutamate and aspartate mono-ADP-ribosylation by PARP1 and its reversal by PARG. Nature Communications 15, 4239 (2024)

Rack, J. G. M.; Voorneveld, J.; Longarini, E. J.; Wijngaarden, S.; Zhu, K.; Peters, A.; Sia, J. J.; Prokhorova, E.; Ahel, D.; Matić, I. et al.; Filippov, D. V.; Ahel, I.: Reversal of tyrosine-linked ADP-ribosylation by ARH3 and PARG. Journal of Biological Chemistry 300, 107838, p. 107838 (2024)

Longarini, E. J.; Dauben, H.: Deciphering ADP-ribosylation signalling. Nature Reviews Molecular Cell Biology (2023)

Dauben, H.; Longarini, E. J.; Matić, I.: A chemical biology/modular antibody platform for ADP-ribosylation signaling. Trends in Biochemical Sciences (2023)

Dauben, H.; Matić, I.; Kidmose, R. T.; Pedersen, B. P.; Saha, T.; Di Virgilio, M.; Sung, J. H.: Turning science into cover art. Trends in Biochemical Sciences 48, pp. 1009 - 1011 (2023)

Longarini, E. J.; Dauben, H.; Locatelli, C.; Wondisford, A. R.; Smith, R.; Muench, C.; Kolvenbach, A.; Lynskey, M. L.; Pope, A.; Bonfiglio, J. J. et al.; Jurado, E. P.; Fajka-Boja, R.; Colby, T.; Schuller, M.; Ahel, I.; Timinszky, G.; O’Sullivan, R. J.; Huet, S.; Matić, I.: Modular antibodies reveal DNA damage-induced mono-ADP-ribosylation as a second wave of PARP1 signaling. Molecular Cell (2023)

Pouikli, A.; Maleszewska, M.; Parekh, S.; Yang, M.; Nikopoulou, C.; Bonfiglio, J. J.; Mylonas, C.; Sandoval, T.; Schumacher, A. L.; Hinze, Y. et al.; Matić, I.; Frezza, C.; Tessarz, P.: Hypoxia promotes osteogenesis by facilitating acetyl-CoA-mediated mitochondrial-nuclear communication. EMBO J, p. e111239 (2022)

Longarini, E. J.; Matić, I.: The fast-growing business of Serine ADP-ribosylation. DNA Repair (Amst) 118, p. 103382 (2022)

Pouikli, A.; Maleszewska, M.; Parekh, S.; Nikopoulou, C.; Bonfiglio, J. J.; Mylonas, C.; Sandoval, T.; Hinze, Y.; Matić, I.; Tessarz, P.: Hypoxia promotes osteogenesis via regulation of the mito-nuclear communication. bioRxiv 2022.2002.2026.482117 (2022)

Adams, M.; Sharma, R.; Colby, T.; Weis, F.; Matić, I.; Bhogaraju, S.: Structural basis for protein glutamylation by the Legionella pseudokinase SidJ. Nat Commun 12 (1), p. 6174 (2021)

Luscher, B.; Ahel, I.; Altmeyer, M.; Ashworth, A.; Bai, P.; Chang, P.; Cohen, M.; Corda, D.; Dantzer, F.; Daugherty, M. D. et al.; Dawson, T. M.; Dawson, V. L.; Deindl, S.; Fehr, A. R.; Feijs, K. L. H.; Filippov, D. V.; Gagne, J. P.; Grimaldi, G.; Guettler, S.; Hoch, N. C.; Hottiger, M. O.; Korn, P.; Kraus, W. L.; Ladurner, A.; Lehtio, L.; Leung, A. K. L.; Lord, C. J.; Mangerich, A.; Matić, I.; Matthews, J.; Moldovan, G. L.; Moss, J.; Natoli, G.; Nielsen, M. L.; Niepel, M.; Nolte, F.; Pascal, J.; Paschal, B. M.; Pawlowski, K.; Poirier, G. G.; Smith, S.; Timinszky, G.; Wang, Z. Q.; Yelamos, J.; Yu, X.; Zaja, R.; Ziegler, M.: ADP-ribosyltransferases, an update on function and nomenclature. FEBS J (2021)

Liu, Y.; Mukherjee, R.; Bonn, F.; Colby, T.; Matić, I.; Glogger, M.; Heilemann, M.; Dikic, I.: Serine-ubiquitination regulates Golgi morphology and the secretory pathway upon Legionella infection. Cell Death Differ 28 (10), pp. 2957 - 2969 (2021)

Bonfiglio, J. J.; Leidecker, O.; Dauben, H.; Longarini, E. J.; Colby, T.; San Segundo-Acosta, P.; Perez, K. A.; Matic, I.: An HPF1/PARP1-Based Chemical Biology Strategy for Exploring ADP-Ribosylation. Cell 183 (4), pp. 1086 - 1102 e23 (2020)

Colby, T.; Bonfiglio, J. J.; Matić, I.: Nonlocalized Searching of HCD Data for Fast and Sensitive Identification of ADP-Ribosylated Peptides. Methods Mol Biol 1813, pp. 255 - 269 (2018)

Bartlett, E.; Bonfiglio, J. J.; Prokhorova, E.; Colby, T.; Zobel, F.; Ahel, I.; Matic, I.: Interplay of Histone Marks with Serine ADP-Ribosylation. Cell Rep 24 (13), pp. 3488 - 3502 e5 (2018)